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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941221.1_cds_XP_016485175.1_76124
CDS Infomation

[gene=LOC107805623] [db_xref=GeneID:107805623] [protein=potassium channel KAT3-like isoform X2] [protein_id=XP_016485175.1] [location=join(2340..2470,2669..2884,2948..3103,3617..3674,3767..4084,4181..4420,4812..4910,5117..5302,5417..5987,6419..6540)] [gbkey=CDS]
Sequence

ATGTCATTTTCTTATACTAAAAATTGTGAGTTCTTCTCCAATGATCATCTCCTTCCTTCT
CTCGGAACAAGAATCAACCATGATACAAAGCTTCGAAAATATATCATTTCGCCCTTCGAT
CCTCGTTACAGGGCTTGGGAGATGTTTCTACTGATTCTTGTCATATATACGGCCTGGATT
ACGCCTTTCGAGTTTGCATTTCTGAAATACAAAATAGATGGCTTTGTCATATTTGACAAC
ATTGTCAACTGCTTGTTTGCTATTGACATTTTCCTTACCTTTTTCATGGCTTATCTTCAT
CCAGAATCCTATATTCTTGTAGATGATCCCAAGAAGATAGCGATAAGGTATTTATCGACC
TGGTTCATGTTTGATGTTTGTTCCACTGTGCCATTTCATGCTTTCCTCTTTATTGATCAC
AAAAAAAGTGATGGAGTTGGATTCAAATTGCTCAGTATGCTCAGACTTTGGCGTCTTAGA
AGAGTTAGTGCCTTGTTTGCAAGACTTGAAAAGGACATCCGTTTTAACTATTTTTGGACG
CGATATGCAAAATTGATCTCTGTAACTTTATTTGCAGTGCATTGTGCTGGATGCTTTAAC
TATGTGATTGCAGATAGATATCCTGATACTAAAAAGACATGGATTGGTGCATCAAATCCC
AATTTCAAAGAAGAAAGTCTATGGGACAGATATATAACTTCACTTTATTGGTCTATTGTA
ACACTAACAACAACTGGTTATGGAGATTTACATGCTGAAAATACAAGAGAGATGCTCTTT
GATATCTTTTACATGTTATTCAACTTAGGATTGACATCTTATATCATTGGAAACATGACA
AATCTCGTTGTTCACAAGACCGGCTACACCAGAAATTTCAGGGATAAAGTTGAAGCAGCT
CAAGAATTTGCAAAACGGAATCAGTTGTCCCCGCGGATACAAGATCAGATTCTGTCTCAT
ATCTGTCTAAAGTTCAAAACTGAAGCATTACAACAAGATGAGACATTGAATGTCCTGCCA
AAATCCATCAAAACAAGCATTGCAAATTACCTGTTTATCCCAATAGTTCAAAATATCAGT
CTGTTCCAAGGTGTTTCCAGGGACATGCTCTTCCAACTGGTTCCTGAAATGGAAGCTGAG
TACTTCCCTCCCAAGGAAGATGTGATTCTACAAAATGAGGCTCCAACAGAATTGTATATA
ATAGTCACTGGAACAGTGATCATTGGAAAAGCCGTTGCTGGAGAATCATTTGGAGAAATA
GGGGTTTTATTTGGAAGACCACAACCATATGCTGTTAGAACAACACAGCTTTCTCAAATT
ATACGCCTGAAGACGACAACGTTTTTGAACATTATTCGAGCAAATCCAGAAGATGAACAG
ATTATAATGAAGAATCTTGTTCTGAAGCTGCAAAGTTTTGGAGGCTTTGATTTTGTGGAC
CAAGAAAGTGAGCAAAATTTAGTCTTCAACGACTCGTTAAATGTTGGACAAAAAGATGAA
TGCTGCTCTCGTGTTTTACAACAAGATACACCTCTGGTTAGCATAAATATCCAAAATTTA
GAAGCTAGAGTTAAGAAACAAGTAGAAAATGAAGGTGACAGTAATGAAGATCATCAACTC
GACGCAAAAGGGTGGATAGCAATAACTCAAGCAGAACATGAAGGAAACAAAAGCATGCAT
GAGTTGTTATCAAATCTTGAAAATGACAGTGAGTTAAATGAGAAGAAAGGTAATTTCATT
AGATTAGATGAAGAAATAAGTAGTAGTCAATTCAAGAATTCAAGAAATGAGGTCCCCTGC
TGTTCTTATTCAAGCAATAGAAGATCTACTTCCACAAGCTGTATTGGTGCAAAAGGGACA
AAATCAACAAAGAAGAGAGTTACCATTCACATGAAAAAGAATAATTCATTGAAGGAGCAT
TATGGGAAGCTAATAATACTACCTGATACACTTGAAGAGCTATTCAAAATAGCAGGTGAG
AGATTTGGGGACTACAATCTCAAGAAAGTTGTAAATGCAGAAAATGTAGAAATAGATGAG
CTAGATGTCATTAGAGATGGTGATCATTTGTATCTTCTTTCAACTAATGTGACGTGA

Peptide Sequence

PEP ID

XP_016485175.1
PEP Infomation

PREDICTED: potassium channel KAT3-like isoform X2 [Nicotiana tabacum]
Sequence

MSFSYTKNCEFFSNDHLLPSLGTRINHDTKLRKYIISPFDPRYRAWEMFLLILVIYTAWI
TPFEFAFLKYKIDGFVIFDNIVNCLFAIDIFLTFFMAYLHPESYILVDDPKKIAIRYLST
WFMFDVCSTVPFHAFLFIDHKKSDGVGFKLLSMLRLWRLRRVSALFARLEKDIRFNYFWT
RYAKLISVTLFAVHCAGCFNYVIADRYPDTKKTWIGASNPNFKEESLWDRYITSLYWSIV
TLTTTGYGDLHAENTREMLFDIFYMLFNLGLTSYIIGNMTNLVVHKTGYTRNFRDKVEAA
QEFAKRNQLSPRIQDQILSHICLKFKTEALQQDETLNVLPKSIKTSIANYLFIPIVQNIS
LFQGVSRDMLFQLVPEMEAEYFPPKEDVILQNEAPTELYIIVTGTVIIGKAVAGESFGEI
GVLFGRPQPYAVRTTQLSQIIRLKTTTFLNIIRANPEDEQIIMKNLVLKLQSFGGFDFVD
QESEQNLVFNDSLNVGQKDECCSRVLQQDTPLVSINIQNLEARVKKQVENEGDSNEDHQL
DAKGWIAITQAEHEGNKSMHELLSNLENDSELNEKKGNFIRLDEEISSSQFKNSRNEVPC
CSYSSNRRSTSTSCIGAKGTKSTKKRVTIHMKKNNSLKEHYGKLIILPDTLEELFKIAGE
RFGDYNLKKVVNAENVEIDELDVIRDGDHLYLLSTNVT

Transcript Sequence

Gene sequence data has not been registered.